Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813558.1_cds_XP_016497600.1_11714
CDS Infomation

[gene=LOC107816398] [db_xref=GeneID:107816398] [protein=inactive glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic-like isoform X2] [protein_id=XP_016497600.1] [location=complement(join(23164..23280,23439..23546,23895..23993,24105..24216,24321..24424,24587..24754,24874..25125,25426..25716,26314..26472))] [gbkey=CDS]
Sequence

ATGTCTCTTCCTACTTGGTTTAATCTCAAGATTAATGCCCCTCATTATGTTTACAAGCCT
ACATCAAAGCTCATTCCAGCTTCTGTTCCATCAAAATTGAATCAATCATATACACAACAT
TTTGAATGTCCAAACTCTCTAATTCCTCCAGCAGATCAGAATGTTGCAGCAATTGTGTTT
GGAGATGGATCAAATTCAAGACTTTATCCATTGACAAAGAGAAGATCAGAGTCTGCACTT
CCTATAGCAGGAAACTACAGACTCATTGATGCGGTTGTTAGCAACTGCATCAATAGTAAT
ATAAGGAAGATATATGCACTTACACAATTTAACTCTGCCTCTCTAAATACCCACCTTTCA
AGAGCTTATTCGAGTGCACGAATCGGGAACGAAGCATTAGTTGAAGTAATTGCAGCTTAT
CAGAGTCCTGAGGGCAAAGGCTGGTTTCAGGGAACTGCTGATGCTATAAGAAGATGTTTG
TGGGTATTAGAAGAGTACCCGATCCTCGAGTTTCTACTGCTTCCCGGTTACCATCTTTAC
AAAATGGATTTCCAGGAACTCTTAGAGGCTCACTGGAACAACAGAGCTGATATAACTGTT
GCAGTGTTAAGTCGAACGAGGGATAACGATACAGAATTTGGTACTTTCCAACTAAATTCT
GAAAATCAAGTCATTGCTTTCAAAGACAATCCAGATAAGAGAGTACAAAATTCAGAGAAA
TCAAATGATATTTCTCATGATAAGTTTGCCAGCATGGATATTTATGTTGTTAATAAAGAG
GCTATGATAAAGCTTCTGACAGAGTATCATCCTTTGGCCAATGACTTCAGAAGAGAAGTT
GTACCAGGTGCAATTTCCTTAGGAATGAATGTATATGCACACAAATTCAGCGGGTACTGG
GACGATATGAGAAGCATTGAAGCTTACTACCGGGCAAATATAGAAAGCATAAAGAATACA
AATAAGGCATATTGCTTGTATGACAAAGACTCTCCGTTATACACTTTGCCTCGACACCTA
CCTCCAACTCAGATAACTGATGCTGTTATAACGGACTCTGTGATCGGAGATGGATGCTTT
CTCAATAGATGCAAGATCAGAGGTACAGTTGTTGGCATGAGGACAAGAGTAGGAGATGGA
GCAATAATTGAGGATTCAGTAATAATGGGTTCTGATACTTACCAAAGTGGTCGTGCAGAG
GAGGATATCCACATTCCTATTGGAATTGGAGAAGGCTCACGAATAAGGAAAGCAATAATC
GATAAGAATGTGAGAATTGGCAAAAATGTTAAGATTCTGAATAAGGAAAATATCCAAGAG
TGTAATAATGAAGCAAATGGCTACATCATTACTGGAGGCATAGTTGTAATTTTGAAGGGT
GCCATTATTCCAAATGGAAGCATTATATGA

Peptide Sequence

PEP ID

XP_016497600.1
PEP Infomation

PREDICTED: inactive glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MSLPTWFNLKINAPHYVYKPTSKLIPASVPSKLNQSYTQHFECPNSLIPPADQNVAAIVF
GDGSNSRLYPLTKRRSESALPIAGNYRLIDAVVSNCINSNIRKIYALTQFNSASLNTHLS
RAYSSARIGNEALVEVIAAYQSPEGKGWFQGTADAIRRCLWVLEEYPILEFLLLPGYHLY
KMDFQELLEAHWNNRADITVAVLSRTRDNDTEFGTFQLNSENQVIAFKDNPDKRVQNSEK
SNDISHDKFASMDIYVVNKEAMIKLLTEYHPLANDFRREVVPGAISLGMNVYAHKFSGYW
DDMRSIEAYYRANIESIKNTNKAYCLYDKDSPLYTLPRHLPPTQITDAVITDSVIGDGCF
LNRCKIRGTVVGMRTRVGDGAIIEDSVIMGSDTYQSGRAEEDIHIPIGIGEGSRIRKAII
DKNVRIGKNVKILNKENIQECNNEANGYIITGGIVVILKGAIIPNGSII

Transcript Sequence

Gene sequence data has not been registered.